Transcript: ENST00000227665.4 APOA5-001

Description

apolipoprotein A-V [Source:HGNC Symbol;Acc:17288]

Gene Synonyms

APOA-V, APOAV, RAP3

Location

About this transcript

This transcript has 3 exons, is annotated with 11 domains and features, is associated with 1574 variant alleles and maps to 309 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000542499.1	APOA5-201	1929	366aa	ENSP00000445002.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8376	B0YIW1 C9JZZ0 Q6Q788	NM_052968.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000227665.4	APOA5-001	1897	366aa	ENSP00000227665.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8376	B0YIW1 C9JZZ0 Q6Q788	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433069.1	APOA5-002	526	162aa	ENSP00000399701.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JZZ0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,897 bps, Translation length: 366 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6Q788

CCDS

This transcript is a member of the Human CCDS set: CCDS8376

Version

ENST00000227665.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000106285 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.