Transcript: ENST00000531000.1 DDX25-006

Description

DEAD (Asp-Glu-Ala-Asp) box helicase 25 [Source:HGNC Symbol;Acc:18698]

Gene Synonyms

GRTH

Location

Chromosome 11: 125,790,853-125,793,158 forward strand.

About this transcript

This transcript has 2 exons, is associated with 967 variant alleles and maps to 143 oligo probes.

Gene

This transcript is a product of gene ENSG00000109832.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263576.6	DDX25-001	1836	483aa	ENSP00000263576.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44766	B1NSN7 B4YF11 Q9UHL0	NM_013264.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530414.1	DDX25-003	2276	468aa	ENSP00000463333.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1NSN7 B4DHI6 B4YF11 J3QL17	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000526875.1	DDX25-004	1445	407aa	ENSP00000436087.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1NSN7 B4YF11	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000530129.2	DDX25-005	574	191aa	ENSP00000432800.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YD26	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000584970.1	DDX25-008	460	67aa	ENSP00000464251.1	Nonsense mediated decay		B1NSN7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000525943.1	DDX25-002	1646	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000531000.1	DDX25-006	866	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000532928.1	DDX25-007	726	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 866 bps,

Version

ENST00000531000.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000386740 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000531000.1 DDX25-006

Summary