Transcript: ENST00000263576.6 DDX25-001

Description

DEAD (Asp-Glu-Ala-Asp) box helicase 25 [Source:HGNC Symbol;Acc:18698]

Gene Synonyms

GRTH

Location

Chromosome 11: 125,774,258-125,793,005 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 14 domains and features, is associated with 8296 variant alleles and maps to 412 oligo probes.

Gene

This transcript is a product of gene ENSG00000109832.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263576.6	DDX25-001	1836	483aa	ENSP00000263576.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44766	B1NSN7 B4YF11 Q9UHL0	NM_013264.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530414.1	DDX25-003	2276	468aa	ENSP00000463333.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1NSN7 B4DHI6 B4YF11 J3QL17	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000526875.1	DDX25-004	1445	407aa	ENSP00000436087.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1NSN7 B4YF11	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000530129.2	DDX25-005	574	191aa	ENSP00000432800.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YD26	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000584970.1	DDX25-008	460	67aa	ENSP00000464251.1	Nonsense mediated decay		B1NSN7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000525943.1	DDX25-002	1646	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000531000.1	DDX25-006	866	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000532928.1	DDX25-007	726	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,836 bps, Translation length: 483 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UHL0

CCDS

This transcript is a member of the Human CCDS set: CCDS44766

Version

ENST00000263576.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000386736 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

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Recent locations

Transcript: ENST00000263576.6 DDX25-001

Summary