Transcript: ENST00000382120.3 SOD3-001

Description

superoxide dismutase 3, extracellular [Source:HGNC Symbol;Acc:11181]

Gene Synonyms

EC-SOD

Location

About this transcript

This transcript has 2 exons, is annotated with 14 domains and features, is associated with 2797 variant alleles and maps to 323 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000382120.3	SOD3-001	1526	240aa	ENSP00000371554.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3430	M0R1V4 P08294	NM_003102.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000598411.1	SOD3-002	276	54aa	ENSP00000472134.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R1V4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000593742.1	SOD3-003	567	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 1,526 bps, Translation length: 240 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P08294

CCDS

This transcript is a member of the Human CCDS set: CCDS3430

Version

ENST00000382120.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000250416 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.