Transcript: ENST00000502407.1 GALNT7-007

Description

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7) [Source:HGNC Symbol;Acc:4129]

Gene Synonyms

GALNAC-T7, GalNAcT7

Location

Chromosome 4: 174,203,586-174,216,911 forward strand.

About this transcript

This transcript has 3 exons, is associated with 5170 variant alleles and maps to 91 oligo probes.

Gene

This transcript is a product of gene ENSG00000109586.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265000.4	GALNT7-001	4307	657aa	ENSP00000265000.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3815	Q4W5F7 Q86SF2	NM_017423.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000505308.1	GALNT7-003	1658	454aa	ENSP00000427095.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000512285.1	GALNT7-004	1567	383aa	ENSP00000427050.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PBY3 Q4W5F7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000503213.1	GALNT7-005	648	199aa	ENSP00000427341.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000502407.1	GALNT7-007	568	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000515862.1	GALNT7-002	3569	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000506317.1	GALNT7-006	583	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 568 bps,

Version

ENST00000502407.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000362752 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000502407.1 GALNT7-007

Summary