Transcript: ENST00000580666.1 SLC16A6-001

Description

solute carrier family 16, member 6 [Source:HGNC Symbol;Acc:10927]

Gene Synonyms

MCT6, MCT7

Location

About this transcript

This transcript has 6 exons, is annotated with 24 domains and features, is associated with 9972 variant alleles and maps to 402 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000327268.4	SLC16A6-002	3807	523aa	ENSP00000319991.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11675	A1L174 J3KS02 O15403	NM_001174166.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000580666.1	SLC16A6-001	2659	523aa	ENSP00000462985.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11675	A1L174 J3KS02 O15403	NM_004694.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000582867.1	SLC16A6-003	584	85aa	ENSP00000462239.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KS02	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000583477.1	SLC16A6-004	577	129aa	ENSP00000463070.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KTN2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 2,659 bps, Translation length: 523 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O15403

CCDS

This transcript is a member of the Human CCDS set: CCDS11675

Version

ENST00000580666.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000448324 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.