Transcript: ENST00000251642.3 DHX58-001

Description

DEXH (Asp-Glu-X-His) box polypeptide 58 [Source:HGNC Symbol;Acc:29517]

Gene Synonyms

D11LGP2, D11LGP2E, D11lgp2e, LGP2, RLR-3

Location

Chromosome 17: 40,253,422-40,264,751 reverse strand.

About this transcript

This transcript has 14 exons, is annotated with 18 domains and features, is associated with 5703 variant alleles and maps to 520 oligo probes.

Gene

This transcript is a product of gene ENSG00000108771.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000251642.3	DHX58-001	2617	678aa	ENSP00000251642.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11416	C9JE76 C9JG98 K7EMZ5 Q96C10	NM_024119.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413196.2	DHX58-002	1283	302aa	ENSP00000416389.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JE76 C9JG98 K7EMZ5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000430773.1	DHX58-003	730	156aa	ENSP00000404639.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JE76	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000591220.1	DHX58-009	540	99aa	ENSP00000466721.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EMZ5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000589979.1	DHX58-012	782	51aa	ENSP00000467470.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000586522.1	DHX58-006	2331	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000592024.1	DHX58-011	941	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000590637.1	DHX58-010	748	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 12, Transcript length: 2,617 bps, Translation length: 678 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96C10

CCDS

This transcript is a member of the Human CCDS set: CCDS11416

Version

ENST00000251642.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000257396 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000251642.3 DHX58-001

Summary