Transcript: ENST00000225698.4 C1QBP-001

Description

complement component 1, q subcomponent binding protein [Source:HGNC Symbol;Acc:1243]

Gene Synonyms

GC1QBP, HABP1, SF2P32, SF2p32, gC1Q-R, gC1qR, p32

Location

Chromosome 17: 5,336,097-5,342,475 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 6 domains and features, is associated with 3483 variant alleles and maps to 405 oligo probes.

Gene

This transcript is a product of gene ENSG00000108561.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000225698.4	C1QBP-001	1169	282aa	ENSP00000225698.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11071	I3L3B0 I3L3Q7 Q07021	NM_001212.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000574444.1	C1QBP-003	901	178aa	ENSP00000460308.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L3B0 I3L3Q7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000570805.1	C1QBP-007	688	177aa	ENSP00000460638.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L3Q7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000576122.1	C1QBP-004	383	9aa	ENSP00000458624.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000573204.1	C1QBP-006	911	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000573406.1	C1QBP-002	767	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000573421.1	C1QBP-005	330	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,169 bps, Translation length: 282 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q07021

CCDS

This transcript is a member of the Human CCDS set: CCDS11071

Version

ENST00000225698.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000439388 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000225698.4 C1QBP-001

Summary