Transcript: ENST00000581994.1 MED13-002

Description

mediator complex subunit 13 [Source:HGNC Symbol;Acc:22474]

Gene Synonyms

ARC250, DRIP250, HSPC221, KIAA0593, THRAP1, TRAP240

Location

Chromosome 17: 60,106,638-60,108,850 reverse strand.

About this transcript

This transcript has 1 exon, is associated with 989 variant alleles and maps to 140 oligo probes.

Gene

This transcript is a product of gene ENSG00000108510.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000397786.2	MED13-001	10465	2174aa	ENSP00000380888.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42366	Q9UHV7	NM_005121.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000583958.1	MED13-003	1068	327aa	ENSP00000464131.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9P0Q5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000580896.1	MED13-004	251	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000581994.1	MED13-002	2213	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000578132.1	MED13-005	751	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000582786.1	MED13-006	341	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 1, Coding exons: 0, Transcript length: 2,213 bps,

Version

ENST00000581994.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000445464 (version 1)

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Transcript: ENST00000581994.1 MED13-002

Summary