Transcript: ENST00000472580.2 PPIF-003

Description

peptidylprolyl isomerase F [Source:HGNC Symbol;Acc:9259]

Gene Synonyms

CYP3, CyP-M, Cyp-D, CypD, hCyP3

Location

About this transcript

This transcript has 6 exons, is annotated with 10 domains and features, is associated with 2633 variant alleles and maps to 290 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000225174.3	PPIF-001	2190	207aa	ENSP00000225174.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7358	P30405	NM_005729.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394579.3	PPIF-201	1258	155aa	ENSP00000378080.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q2YDB7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000448165.1	PPIF-004	821	165aa	ENSP00000396388.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000472580.2	PPIF-003	761	145aa	ENSP00000473548.1	Nonsense mediated decay		R4GN99	-	-
ENST00000492149.1	PPIF-005	646	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498681.1	PPIF-002	518	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 761 bps, Translation length: 145 residues

Version

ENST00000472580.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000048951 (version 2)