Transcript: ENST00000225174.3 PPIF-001

Description

peptidylprolyl isomerase F [Source:HGNC Symbol;Acc:9259]

Gene Synonyms

CYP3, CyP-M, Cyp-D, CypD, hCyP3

Location

About this transcript

This transcript has 6 exons, is annotated with 14 domains and features, is associated with 3303 variant alleles and maps to 433 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000225174.3	PPIF-001	2190	207aa	ENSP00000225174.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7358	P30405	NM_005729.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394579.3	PPIF-201	1258	155aa	ENSP00000378080.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q2YDB7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000448165.1	PPIF-004	821	165aa	ENSP00000396388.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000472580.2	PPIF-003	761	145aa	ENSP00000473548.1	Nonsense mediated decay		R4GN99	-	-
ENST00000492149.1	PPIF-005	646	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498681.1	PPIF-002	518	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,190 bps, Translation length: 207 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P30405

CCDS

This transcript is a member of the Human CCDS set: CCDS7358

Version

ENST00000225174.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000048949 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.