Transcript: ENST00000463279.2 SPOCK2-002

Description

sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2 [Source:HGNC Symbol;Acc:13564]

Gene Synonyms

KIAA0275, TICN2, testican-2

Location

Chromosome 10: 73,822,563-73,829,009 reverse strand.

About this transcript

This transcript has 7 exons, is associated with 3041 variant alleles and maps to 228 oligo probes.

Gene

This transcript is a product of gene ENSG00000107742.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000373109.2	SPOCK2-004	5445	424aa	ENSP00000362201.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7313	B4DFA9 Q92563	NM_001244950.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000317376.4	SPOCK2-201	5328	424aa	ENSP00000321108.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7313	B4DFA9 Q92563	NM_014767.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536168.1	SPOCK2-203	5000	424aa	ENSP00000439445.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H283	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000412663.1	SPOCK2-202	1284	77aa	ENSP00000397715.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44431	Q92563	NM_001134434.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000460053.1	SPOCK2-006	812	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469121.1	SPOCK2-001	807	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463279.2	SPOCK2-002	798	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495888.1	SPOCK2-005	694	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483699.1	SPOCK2-003	300	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 798 bps,

Version

ENST00000463279.2

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000048558 (version 2)

Annotation Attributes

low sequence quality [Definitions]

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Favourite species

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Recent locations

Transcript: ENST00000463279.2 SPOCK2-002

Summary