Transcript: ENST00000373109.2 SPOCK2-004

Description

sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2 [Source:HGNC Symbol;Acc:13564]

Gene Synonyms

KIAA0275, TICN2, testican-2

Location

Chromosome 10: 73,818,793-73,848,531 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 23 domains and features, is associated with 12942 variant alleles and maps to 701 oligo probes.

Gene

This transcript is a product of gene ENSG00000107742.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000373109.2	SPOCK2-004	5445	424aa	ENSP00000362201.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7313	B4DFA9 Q92563	NM_001244950.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000317376.4	SPOCK2-201	5328	424aa	ENSP00000321108.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7313	B4DFA9 Q92563	NM_014767.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536168.1	SPOCK2-203	5000	424aa	ENSP00000439445.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H283	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000412663.1	SPOCK2-202	1284	77aa	ENSP00000397715.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44431	Q92563	NM_001134434.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000460053.1	SPOCK2-006	812	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469121.1	SPOCK2-001	807	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463279.2	SPOCK2-002	798	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495888.1	SPOCK2-005	694	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483699.1	SPOCK2-003	300	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 5,445 bps, Translation length: 424 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q92563

CCDS

This transcript is a member of the Human CCDS set: CCDS7313

Version

ENST00000373109.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000048560 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000373109.2 SPOCK2-004

Summary