Transcript: ENST00000459911.1 NSMCE4A-004

Description

non-SMC element 4 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:25935]

Gene Synonyms

C10orf86, FLJ20003, NS4EA, NSE4A, bA500G22.3

Location

Chromosome 10: 123,716,606-123,719,300 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 1090 variant alleles and maps to 179 oligo probes.

Gene

This transcript is a product of gene ENSG00000107672.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369023.3	NSMCE4A-005	1394	385aa	ENSP00000358019.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7624	Q9NXX6	NM_017615.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538652.1	NSMCE4A-201	1409	172aa	ENSP00000445856.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DWS2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369017.5	NSMCE4A-007	1224	316aa	ENSP00000358013.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9NXX6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000489266.1	NSMCE4A-006	2399	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468209.1	NSMCE4A-012	1041	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464321.1	NSMCE4A-010	822	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472431.1	NSMCE4A-013	819	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000459911.1	NSMCE4A-004	541	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465189.1	NSMCE4A-009	440	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481320.1	NSMCE4A-008	1345	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000483541.1	NSMCE4A-001	694	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000477289.1	NSMCE4A-002	643	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 541 bps,

Version

ENST00000459911.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000050748 (version 1)

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Transcript: ENST00000459911.1 NSMCE4A-004

Summary