Transcript: ENST00000388918.5 TYRP1-001

Description

tyrosinase-related protein 1 [Source:HGNC Symbol;Acc:12450]

Gene Synonyms

CAS2, CATB, GP75, OCA3, TRP, TRP1, TYRP, TYRRP, b-PROTEIN

Location

Chromosome 9: 12,693,435-12,710,290 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 15 domains and features, is associated with 9491 variant alleles and maps to 506 oligo probes.

Gene

This transcript is a product of gene ENSG00000107165.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000388918.5	TYRP1-001	2851	537aa	ENSP00000373570.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34990	B4DNE6 C9JZ52 P17643	NM_000550.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381137.2	TYRP1-201	2668	246aa	ENSP00000370529.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5W0M5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381136.2	TYRP1-002	872	247aa	ENSP00000370528.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EQI3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000473763.1	TYRP1-005	549	102aa	ENSP00000419006.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JZ52	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000473504.1	TYRP1-004	791	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000381142.3	TYRP1-008	789	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470909.1	TYRP1-003	343	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000459790.1	TYRP1-006	746	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 2,851 bps, Translation length: 537 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P17643

CCDS

This transcript is a member of the Human CCDS set: CCDS34990

Version

ENST00000388918.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000055502 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000388918.5 TYRP1-001

Summary