Transcript: ENST00000375859.3 SPIN1-001

Description

spindlin 1 [Source:HGNC Symbol;Acc:11243]

Gene Synonyms

OCR, SPIN

Location

Chromosome 9: 91,003,334-91,093,609 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 6 domains and features, is associated with 45316 variant alleles and maps to 532 oligo probes.

Gene

This transcript is a product of gene ENSG00000106723.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000375859.3	SPIN1-001	4484	262aa	ENSP00000365019.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43843	Q9Y657	NM_006717.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541629.1	SPIN1-201	2082	262aa	ENSP00000441864.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43843	Q9Y657	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000469017.2	SPIN1-004	2082	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485804.1	SPIN1-003	814	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485565.2	SPIN1-006	706	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483785.1	SPIN1-002	659	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462844.1	SPIN1-005	599	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 4,484 bps, Translation length: 262 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y657

CCDS

This transcript is a member of the Human CCDS set: CCDS43843

Version

ENST00000375859.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000052967 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000375859.3 SPIN1-001

Summary