Transcript: ENST00000401447.1 RPA3-006

Description

replication protein A3, 14kDa [Source:HGNC Symbol;Acc:10291]

Gene Synonyms

REPA3, RPA14

Location

Chromosome 7: 7,676,606-7,679,657 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 1620 variant alleles and maps to 151 oligo probes.

Gene

This transcript is a product of gene ENSG00000106399.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000223129.4	RPA3-001	2020	121aa	ENSP00000223129.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5356	A4D105 B5MC59 P35244	NM_002947.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396682.2	RPA3-003	847	121aa	ENSP00000379914.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5356	A4D105 B5MC59 P35244	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406109.1	RPA3-004	434	82aa	ENSP00000384652.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MC59	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000401447.1	RPA3-006	414	82aa	ENSP00000385383.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MC59	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000462723.1	RPA3-007	989	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000463632.1	RPA3-008	793	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000483031.1	RPA3-002	641	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 414 bps, Translation length: 82 residues

Version

ENST00000401447.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000324783 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000401447.1 RPA3-006

Summary