Transcript: ENST00000223129.4 RPA3-001

Description

replication protein A3, 14kDa [Source:HGNC Symbol;Acc:10291]

Gene Synonyms

REPA3, RPA14

Location

Chromosome 7: 7,676,149-7,758,238 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 5 domains and features, is associated with 39318 variant alleles and maps to 544 oligo probes.

Gene

This transcript is a product of gene ENSG00000106399.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000223129.4	RPA3-001	2020	121aa	ENSP00000223129.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5356	A4D105 B5MC59 P35244	NM_002947.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396682.2	RPA3-003	847	121aa	ENSP00000379914.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5356	A4D105 B5MC59 P35244	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406109.1	RPA3-004	434	82aa	ENSP00000384652.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MC59	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000401447.1	RPA3-006	414	82aa	ENSP00000385383.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MC59	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000462723.1	RPA3-007	989	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000463632.1	RPA3-008	793	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000483031.1	RPA3-002	641	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 4, Transcript length: 2,020 bps, Translation length: 121 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P35244

CCDS

This transcript is a member of the Human CCDS set: CCDS5356

Version

ENST00000223129.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000324778 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000223129.4 RPA3-001

Summary