Transcript: ENST00000223026.4 HYAL4-003

Description

hyaluronoglucosaminidase 4 [Source:HGNC Symbol;Acc:5323]

Gene Synonyms

CSHY

Location

Chromosome 7: 123,485,223-123,517,532 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 18 domains and features, is associated with 13559 variant alleles and maps to 323 oligo probes.

Gene

This transcript is a product of gene ENSG00000106302.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000223026.4	HYAL4-003	2407	481aa	ENSP00000223026.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5789	C9J6F9 C9JU18 Q2M3T9	NM_012269.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000476325.1	HYAL4-001	1616	481aa	ENSP00000417186.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5789	C9J6F9 C9JU18 Q2M3T9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000489978.1	HYAL4-004	589	63aa	ENSP00000419522.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J6F9 C9JU18	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000488323.1	HYAL4-005	314	45aa	ENSP00000417872.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J6F9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000483878.1	HYAL4-002	1609	349aa	ENSP00000420264.1	Nonsense mediated decay		C9J6F9 C9JU18 F8WDH9	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 2,407 bps, Translation length: 481 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q2M3T9

CCDS

This transcript is a member of the Human CCDS set: CCDS5789

Version

ENST00000223026.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000348545 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000223026.4 HYAL4-003

Summary