Transcript: ENST00000447574.1 HSPB1-002

Description

heat shock 27kDa protein 1 [Source:HGNC Symbol;Acc:5246]

Gene Synonyms

CMT2F, HEL-S-102, HMN2B, HS.76067, HSP27, HSP28, Hs.76067, Hsp25, SRP27

Location

About this transcript

This transcript has 2 exons, is annotated with 7 domains and features, is associated with 1612 variant alleles and maps to 453 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000248553.6	HSPB1-001	909	205aa	ENSP00000248553.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5583	C9J3N8 P04792	NM_001540.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000429938.1	HSPB1-003	527	37aa	ENSP00000405285.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J3N8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000447574.1	HSPB1-002	1455	186aa	ENSP00000414357.1	Nonsense mediated decay		F8WE04	-	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 1,455 bps, Translation length: 186 residues

Version

ENST00000447574.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000341395 (version 1)