Description
HMG-box transcription factor 1 [Source:HGNC Symbol;Acc:23200]
Location
Chromosome 7: 106,810,165-106,820,423 forward strand.
About this transcript
This transcript has 2 exons, is associated with 5280 variant alleles and maps to 99 oligo probes.
Gene
This transcript is a product of gene ENSG00000105856.9 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000222574.4 | HBP1-001 | 2829 | 514aa | ENSP00000222574.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS5741 | B4DJ36 C9J5U3 C9J8V6 C9JAW1 C9JPK6 C9JQU7 H7C4S2 O60381 | NM_012257.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000468410.1 | HBP1-002 | 2704 | 514aa | ENSP00000420500.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS5741 | B4DJ36 C9J5U3 C9J8V6 C9JAW1 C9JPK6 C9JQU7 H7C4S2 O60381 | NM_001244262.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000485846.1 | HBP1-003 | 2420 | 514aa | ENSP00000418738.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS5741 | B4DJ36 C9J5U3 C9J8V6 C9JAW1 C9JPK6 C9JQU7 H7C4S2 O60381 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000498408.1 | HBP1-013 | 2332 | 454aa | ENSP00000418017.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7C4S2 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000497535.1 | HBP1-007 | 702 | 108aa | ENSP00000417631.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J8V6 C9JAW1 C9JPK6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000479011.1 | HBP1-009 | 601 | 111aa | ENSP00000417927.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J5U3 C9J8V6 C9JAW1 C9JPK6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000468401.1 | HBP1-006 | 573 | 28aa | ENSP00000420281.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JPK6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000478930.1 | HBP1-004 | 563 | 70aa | ENSP00000418022.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JAW1 C9JPK6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000464009.1 | HBP1-008 | 478 | 124aa | ENSP00000420137.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J5U3 C9J8V6 C9JAW1 C9JPK6 C9JQU7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000607681.1 | HBP1-015 | 476 | 154aa | ENSP00000475809.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000463790.1 | HBP1-014 | 433 | 85aa | ENSP00000419143.1 | Nonsense mediated decay | H7C574 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000461963.1 | HBP1-010 | 581 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000468116.1 | HBP1-005 | 579 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000463202.1 | HBP1-012 | 2646 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000483809.1 | HBP1-011 | 582 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |