Transcript: ENST00000222543.5 TFPI2-001

Description

tissue factor pathway inhibitor 2 [Source:HGNC Symbol;Acc:11761]

Gene Synonyms

PP5, REF1, TFPI-2

Location

About this transcript

This transcript has 5 exons, is annotated with 26 domains and features, is associated with 3029 variant alleles and maps to 563 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000222543.5	TFPI2-001	2444	235aa	ENSP00000222543.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5632	P48307 Q8NAK6 Q8NE89	NM_006528.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545378.1	TFPI2-201	1426	124aa	ENSP00000438861.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H3J8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000451238.1	TFPI2-003	781	107aa	ENSP00000416370.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C4A3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000461482.1	TFPI2-002	565	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,444 bps, Translation length: 235 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P48307

CCDS

This transcript is a member of the Human CCDS set: CCDS5632

Version

ENST00000222543.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000254720 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.