Transcript: ENST00000598660.1 TMEM59L-003

Description

transmembrane protein 59-like [Source:HGNC Symbol;Acc:13237]

Gene Synonyms

BSMAP, C19orf4

Location

Chromosome 19: 18,723,687-18,731,816 forward strand.

About this transcript

This transcript has 7 exons, is associated with 4306 variant alleles and maps to 356 oligo probes.

Gene

This transcript is a product of gene ENSG00000105696.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000600490.1	TMEM59L-001	1717	342aa	ENSP00000470879.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12383	Q9UK28	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000262817.3	TMEM59L-201	1611	342aa	ENSP00000262817.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12383	Q9UK28	NM_012109.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000594709.1	TMEM59L-005	403	134aa	ENSP00000471612.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000598660.1	TMEM59L-003	1683	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000594859.1	TMEM59L-002	1557	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 1,683 bps,

Version

ENST00000598660.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000465142 (version 2)

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Transcript: ENST00000598660.1 TMEM59L-003

Summary