Transcript: ENST00000222286.4 GAPDHS-001

Description

glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:HGNC Symbol;Acc:24864]

Gene Synonyms

GAPD2, GAPDH-2, GAPDH2, GAPDS, HSD-35

Location

About this transcript

This transcript has 11 exons, is annotated with 19 domains and features, is associated with 5555 variant alleles and maps to 426 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000222286.4	GAPDHS-001	1489	408aa	ENSP00000222286.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12465	K7EP73 O14556	NM_014364.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000585510.1	GAPDHS-004	704	179aa	ENSP00000467255.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EP73	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000586334.1	GAPDHS-003	599	44aa	ENSP00000466432.1	Nonsense mediated decay		K7EMB2	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,489 bps, Translation length: 408 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O14556

CCDS

This transcript is a member of the Human CCDS set: CCDS12465

Version

ENST00000222286.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000460423 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.