Transcript: ENST00000251473.5 DKFZP761J1410-001

Description

Lipid phosphate phosphatase-related protein type 2 [Source:UniProtKB/Swiss-Prot;Acc:Q96GM1]

Gene Synonyms

PRG4

Location

Chromosome 19: 11,466,062-11,476,374 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 14 domains and features, is associated with 5104 variant alleles and maps to 497 oligo probes.

Gene

This transcript is a product of gene ENSG00000105520.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000591608.1	DKFZP761J1410-002	2552	427aa	ENSP00000466898.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59352	K7EMX8 Q69YU8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000251473.5	DKFZP761J1410-001	2727	343aa	ENSP00000251473.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12258	K7EQF7 Q96GM1	NM_022737.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591329.1	DKFZP761J1410-004	633	84aa	ENSP00000467807.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EQF7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000586380.1	DKFZP761J1410-006	535	66aa	ENSP00000466698.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EMX8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000586431.1	DKFZP761J1410-005	635	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000588360.1	DKFZP761J1410-009	903	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000587801.1	DKFZP761J1410-008	739	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000588196.1	DKFZP761J1410-007	407	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 8, Transcript length: 2,727 bps, Translation length: 343 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96GM1

CCDS

This transcript is a member of the Human CCDS set: CCDS12258

Version

ENST00000251473.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000458779 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000251473.5 DKFZP761J1410-001

Summary