Transcript: ENST00000597017.1 KDELR1-002

Description

KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 [Source:HGNC Symbol;Acc:6304]

Gene Synonyms

ERD2, ERD2.1, HDEL, PM23

Location

Chromosome 19: 48,885,835-48,894,112 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 12 domains and features, is associated with 4047 variant alleles and maps to 424 oligo probes.

Gene

This transcript is a product of gene ENSG00000105438.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000330720.2	KDELR1-001	1557	212aa	ENSP00000329471.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12718	P24390 Q8NBW7	NM_006801.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000597017.1	KDELR1-002	1594	150aa	ENSP00000470841.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8NBW7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000600980.1	KDELR1-005	815	220aa	ENSP00000472182.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R1Y2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000599084.1	KDELR1-004	582	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000594643.1	KDELR1-003	561	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,594 bps, Translation length: 150 residues

Version

ENST00000597017.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000465709 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000597017.1 KDELR1-002

Summary