Transcript: ENST00000598399.1 RPS19-008

Description

ribosomal protein S19 [Source:HGNC Symbol;Acc:10402]

Gene Synonyms

DBA, DBA1, S19

Location

Chromosome 19: 42,364,848-42,373,262 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 4 domains and features, is associated with 4783 variant alleles and maps to 352 oligo probes.

Gene

This transcript is a product of gene ENSG00000105372.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000598742.1	RPS19-001	2359	145aa	ENSP00000470972.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12588	B0ZBD0 M0QXK4 P39019	NM_001022.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000593863.1	RPS19-006	526	145aa	ENSP00000470004.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12588	B0ZBD0 M0QXK4 P39019	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000221975.2	RPS19-005	500	71aa	ENSP00000221975.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000600467.1	RPS19-002	420	76aa	ENSP00000469228.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QXK4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000601492.1	RPS19-003	342	102aa	ENSP00000471621.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R140	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000598261.1	RPS19-007	307	100aa	ENSP00000469798.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QYF7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000598399.1	RPS19-008	1172	71aa	ENSP00000472660.1	Nonsense mediated decay		M0R2L9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000598466.1	RPS19-004	601	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 1,172 bps, Translation length: 71 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000598399.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000463056 (version 1)

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Transcript: ENST00000598399.1 RPS19-008

Summary