Transcript: ENST00000588622.1 PDCD5-007

Description

programmed cell death 5 [Source:HGNC Symbol;Acc:8764]

Gene Synonyms

MGC9294, TFAR19

Location

Chromosome 19: 33,077,551-33,078,331 forward strand.

About this transcript

This transcript has 2 exons, is associated with 428 variant alleles and maps to 129 oligo probes.

Gene

This transcript is a product of gene ENSG00000105185.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000590247.2	PDCD5-001	699	125aa	ENSP00000466214.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12423	K7EQA1 O14737	NM_004708.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419343.3	PDCD5-002	1799	129aa	ENSP00000476525.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DE64	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000586035.1	PDCD5-008	601	87aa	ENSP00000467737.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EQA1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000592786.1	PDCD5-006	468	65aa	ENSP00000468741.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ESJ4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379316.3	PDCD5-003	154	40aa	ENSP00000368620.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q3HM38	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000221784.4	PDCD5-010	558	55aa	ENSP00000221784.4	Nonsense mediated decay		-	-	-
ENST00000586316.1	PDCD5-005	480	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000588622.1	PDCD5-007	458	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 458 bps,

Version

ENST00000588622.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000450328 (version 1)

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Transcript: ENST00000588622.1 PDCD5-007

Summary