Transcript: ENST00000477255.1 LILRA1-004

Description

leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1 [Source:HGNC Symbol;Acc:6602]

Gene Synonyms

CD85I, CD85i, LIR-6, LIR6

Location

About this transcript

This transcript has 7 exons, is associated with 4423 variant alleles and maps to 462 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000251372.3	LILRA1-001	1910	489aa	ENSP00000251372.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12901	O75019	NM_006863.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000453777.1	LILRA1-002	2313	289aa	ENSP00000413715.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS62802	O75019	NM_001278318.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000473156.1	LILRA1-003	2580	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495417.1	LILRA1-005	1912	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477255.1	LILRA1-004	2084	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 2,084 bps,

Version

ENST00000477255.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000140810 (version 1)