Transcript: ENST00000572515.1 NFKBIB-001

Description

nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta [Source:HGNC Symbol;Acc:7798]

Gene Synonyms

IKBB, TRIP9

Location

Chromosome 19: 39,390,592-39,399,178 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 24 domains and features, is associated with 4304 variant alleles and maps to 615 oligo probes.

Gene

This transcript is a product of gene ENSG00000104825.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000313582.5	NFKBIB-002	1159	356aa	ENSP00000312988.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12524	I3L4X3 Q15653	NM_002503.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392079.3	NFKBIB-201	2203	306aa	ENSP00000375929.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G5E9C2 I3L4X3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000572515.1	NFKBIB-001	1929	338aa	ENSP00000459728.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L4X3 Q15653 Q59EM7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000576510.1	NFKBIB-004	820	233aa	ENSP00000461617.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L4X3	NM_001243116.1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000575359.1	NFKBIB-005	543	149aa	ENSP00000458685.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L1A4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000509705.3	NFKBIB-003	2200	65aa	ENSP00000438598.2	Nonsense mediated decay		H0YFH0	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,929 bps, Translation length: 338 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15653

Version

ENST00000572515.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000438152 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000572515.1 NFKBIB-001

Summary