Transcript: ENST00000424861.2 STK3-004

Description

serine/threonine kinase 3 [Source:HGNC Symbol;Acc:11406]

Gene Synonyms

KRS1, MST2

Location

Chromosome 8: 99,607,558-99,837,894 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 9 domains and features, is associated with 99538 variant alleles and maps to 412 oligo probes.

Gene

This transcript is a product of gene ENSG00000104375.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000523601.1	STK3-002	3107	519aa	ENSP00000429744.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59108	B3KYA7	NM_001256312.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419617.2	STK3-001	2820	491aa	ENSP00000390500.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47900	Q13188	NM_006281.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518165.1	STK3-005	817	228aa	ENSP00000428014.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFQ9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000519420.1	STK3-016	531	1aa	ENSP00000428295.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000424861.2	STK3-004	2065	168aa	ENSP00000428167.1	Nonsense mediated decay		Q8NBU1	-	-
ENST00000521649.1	STK3-006	574	82aa	ENSP00000429369.1	Nonsense mediated decay		E5RIM6	-	-
ENST00000521768.1	STK3-017	1016	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518582.1	STK3-012	725	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000517832.1	STK3-014	594	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000523567.1	STK3-015	587	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000523159.1	STK3-011	537	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000520653.1	STK3-007	531	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000522924.1	STK3-009	510	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518627.1	STK3-010	468	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000523960.1	STK3-003	5333	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000520440.1	STK3-013	697	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000520053.1	STK3-008	577	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 5, Transcript length: 2,065 bps, Translation length: 168 residues

Version

ENST00000424861.2

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000379646 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000424861.2 STK3-004

Summary