Transcript: ENST00000220764.2 DECR1-001

Description

2,4-dienoyl CoA reductase 1, mitochondrial [Source:HGNC Symbol;Acc:2753]

Gene Synonyms

DECR, NADPH, SDR18C1

Location

Chromosome 8: 91,013,633-91,064,236 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 11 domains and features, is associated with 21409 variant alleles and maps to 436 oligo probes.

Gene

This transcript is a product of gene ENSG00000104325.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000220764.2	DECR1-001	1207	335aa	ENSP00000220764.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6250	E5RJD2 Q16698 Q7LDK6	NM_001359.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522161.1	DECR1-003	1766	326aa	ENSP00000429779.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z6B8 E5RJD2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520227.1	DECR1-014	864	151aa	ENSP00000429096.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJD2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000517761.1	DECR1-013	774	205aa	ENSP00000427936.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFV2 E5RJD2 E5RJG7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000519410.1	DECR1-008	705	181aa	ENSP00000430561.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJD2 E5RJG7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000517597.1	DECR1-009	897	41aa	ENSP00000429551.1	Nonsense mediated decay		E5RGS6	-	-
ENST00000519328.1	DECR1-002	816	41aa	ENSP00000431045.1	Nonsense mediated decay		E5RGS6	-	-
ENST00000517314.1	DECR1-004	654	48aa	ENSP00000428533.1	Nonsense mediated decay		E5RHR1	-	-
ENST00000521603.1	DECR1-005	578	41aa	ENSP00000428701.1	Nonsense mediated decay		E5RGS6	-	-
ENST00000518725.1	DECR1-012	527	95aa	ENSP00000430759.1	Nonsense mediated decay		E5RID6	-	-
ENST00000520148.1	DECR1-019	441	43aa	ENSP00000428162.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000519007.1	DECR1-011	762	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000523447.1	DECR1-006	727	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000524326.1	DECR1-016	679	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000520859.1	DECR1-010	567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000521668.1	DECR1-007	520	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000517301.1	DECR1-017	464	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000522583.1	DECR1-015	651	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000524332.1	DECR1-018	645	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,207 bps, Translation length: 335 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q16698

CCDS

This transcript is a member of the Human CCDS set: CCDS6250

Version

ENST00000220764.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000375822 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000220764.2 DECR1-001

Summary