Transcript: ENST00000522539.1 BRF2-004

Description

BRF2, RNA polymerase III transcription initiation factor 50 kDa subunit [Source:HGNC Symbol;Acc:17298]

Gene Synonyms

BRFU, FLJ11052, TFIIIB50

Location

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 1386 variant alleles and maps to 170 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000220659.6	BRF2-001	2603	419aa	ENSP00000220659.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6098	Q9HAW0	NM_018310.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520601.1	BRF2-005	1192	202aa	ENSP00000430107.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGX1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000521170.1	BRF2-003	550	72aa	ENSP00000430193.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGF6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522539.1	BRF2-004	473	72aa	ENSP00000429554.1	Nonsense mediated decay		E5RGF6	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 473 bps, Translation length: 72 residues

Version

ENST00000522539.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000376814 (version 1)