Transcript: ENST00000562850.1 RBL2-008

Description

retinoblastoma-like 2 (p130) [Source:HGNC Symbol;Acc:9894]

Gene Synonyms

P130, RB2, Rb2, p130

Location

Chromosome 16: 53,498,203-53,500,021 forward strand.

About this transcript

This transcript has 2 exons, is associated with 779 variant alleles and maps to 49 oligo probes.

Gene

This transcript is a product of gene ENSG00000103479.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262133.6	RBL2-001	4906	1139aa	ENSP00000262133.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10748	J3KSF7 Q08999	NM_005611.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544545.1	RBL2-201	2098	518aa	ENSP00000444685.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z913	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544405.2	RBL2-002	2025	639aa	ENSP00000443744.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H837 J3KSF7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000567964.2	RBL2-004	838	128aa	ENSP00000462464.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KSF7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000379935.4	RBL2-010	4467	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000561512.1	RBL2-007	838	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000562850.1	RBL2-008	745	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000562837.1	RBL2-009	738	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000564605.1	RBL2-006	635	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 745 bps,

Version

ENST00000562850.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000422483 (version 1)

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Transcript: ENST00000562850.1 RBL2-008

Summary