Transcript: ENST00000370328.3 GABRE-001

Description

gamma-aminobutyric acid (GABA) A receptor, epsilon [Source:HGNC Symbol;Acc:4085]

Gene Synonyms

MIRN224, MIRN452, hsa-mir-452, miRNA224

Location

Chromosome X: 151,121,596-151,143,151 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 34 domains and features, is associated with 7353 variant alleles and maps to 474 oligo probes.

Gene

This transcript is a product of gene ENSG00000102287.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370328.3	GABRE-001	3152	506aa	ENSP00000359353.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14703	P78334	NM_004961.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370325.1	GABRE-002	3243	365aa	ENSP00000359350.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ET93	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393914.3	GABRE-201	1315	139aa	ENSP00000377491.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MT31	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441219.1	GABRE-005	1324	43aa	ENSP00000389384.1	Nonsense mediated decay		F2Z2H5	-	-
ENST00000417300.1	GABRE-012	619	43aa	ENSP00000397335.1	Nonsense mediated decay		F2Z2H5	-	-
ENST00000483564.1	GABRE-008	2747	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462018.1	GABRE-010	650	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486255.1	GABRE-007	6176	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000491339.1	GABRE-011	2072	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000476016.1	GABRE-013	813	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465405.1	GABRE-006	706	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000489333.1	GABRE-015	592	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000474932.1	GABRE-009	430	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000495862.1	GABRE-014	238	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 3,152 bps, Translation length: 506 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P78334

CCDS

This transcript is a member of the Human CCDS set: CCDS14703

Version

ENST00000370328.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000060903 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000370328.3 GABRE-001

Summary