Transcript: ENST00000465985.1 SAMHD1-002

Description

SAM domain and HD domain 1 [Source:HGNC Symbol;Acc:15925]

Gene Synonyms

AGS5, CHBL2, DCIP, HDDC1, MOP-5, MOP5, Mg11, SBBI88

Location

About this transcript

This transcript has 3 exons, is associated with 3349 variant alleles and maps to 137 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262878.4	SAMHD1-001	4784	626aa	ENSP00000262878.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13288	A6NDZ3 Q9Y3Z3	NM_015474.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373694.5	SAMHD1-201	1395	170aa	ENSP00000362798.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NDZ3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000465985.1	SAMHD1-002	516	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 516 bps,

Version

ENST00000465985.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000079063 (version 2)