Transcript: ENST00000370873.4 PSMA7-001

Description

proteasome (prosome, macropain) subunit, alpha type, 7 [Source:HGNC Symbol;Acc:9536]

Gene Synonyms

C6, HSPC, RC6-1, XAPC7

Location

Chromosome 20: 60,711,791-60,718,486 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 11 domains and features, is associated with 3756 variant alleles and maps to 355 oligo probes.

Gene

This transcript is a product of gene ENSG00000101182.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370873.4	PSMA7-001	996	248aa	ENSP00000359910.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13489	O14818	NM_002792.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370858.3	PSMA7-005	925	149aa	ENSP00000359895.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O14818	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370861.1	PSMA7-002	773	178aa	ENSP00000359898.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O14818	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000442551.1	PSMA7-006	685	187aa	ENSP00000397047.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000484488.1	PSMA7-004	1023	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486193.1	PSMA7-003	548	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 996 bps, Translation length: 248 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O14818

CCDS

This transcript is a member of the Human CCDS set: CCDS13489

Version

ENST00000370873.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000079975 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000370873.4 PSMA7-001

Summary