Transcript: ENST00000360864.4 DNAJC5-001

Description

DnaJ (Hsp40) homolog, subfamily C, member 5 [Source:HGNC Symbol;Acc:16235]

Gene Synonyms

CLN4, CLN4B, CSP, DNAJC5A, FLJ00118, FLJ13070, NCL

Location

About this transcript

This transcript has 5 exons, is annotated with 14 domains and features, is associated with 21436 variant alleles and maps to 543 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000360864.4	DNAJC5-001	5213	198aa	ENSP00000354111.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13546	Q6AHX3 Q8TET0 Q9H3Z4	NM_025219.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369911.2	DNAJC5-201	674	167aa	ENSP00000358927.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9H3Z4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000470551.1	DNAJC5-002	5287	167aa	ENSP00000434744.1	Nonsense mediated decay		Q9H3Z4	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 5,213 bps, Translation length: 198 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H3Z4

CCDS

This transcript is a member of the Human CCDS set: CCDS13546

Version

ENST00000360864.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000080244 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.