Transcript: ENST00000396082.2 UPK3A-002

Description

uroplakin 3A [Source:HGNC Symbol;Acc:12580]

Gene Synonyms

UP3A, UPIII, UPIIIA, UPK3

Location

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 5914 variant alleles and maps to 253 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000216211.4	UPK3A-001	1051	287aa	ENSP00000216211.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14064	O75631	NM_006953.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396082.2	UPK3A-002	627	166aa	ENSP00000379391.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54539	O75631	NM_001167574.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 627 bps, Translation length: 166 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75631

CCDS

This transcript is a member of the Human CCDS set: CCDS54539

Version

ENST00000396082.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000322277 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.