Transcript: ENST00000428069.1 MIEF1-004

Description

mitochondrial elongation factor 1 [Source:HGNC Symbol;Acc:25979]

Gene Synonyms

FLJ20232, HSU79252, MID51, MiD51, RP5-1104E15.5, SMCR7L, dJ1104E15.3

Location

Chromosome 22: 39,898,402-39,909,871 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 4 domains and features, is associated with 5310 variant alleles and maps to 227 oligo probes.

Gene

This transcript is a product of gene ENSG00000100335.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000325301.2	MIEF1-001	5625	463aa	ENSP00000327124.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13995	B0QY94 Q9NQG6	NM_019008.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000404569.1	MIEF1-003	3797	463aa	ENSP00000385191.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13995	B0QY94 Q9NQG6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000402881.1	MIEF1-005	2269	478aa	ENSP00000385110.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QY94 B0QY95	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434364.1	MIEF1-015	744	42aa	ENSP00000390029.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QY94	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000433117.2	MIEF1-002	3838	148aa	ENSP00000404096.2	Nonsense mediated decay		B0QY94 Q7L890	-	-
ENST00000428069.1	MIEF1-004	1379	148aa	ENSP00000413730.1	Nonsense mediated decay		B0QY94 Q7L890	-	-
ENST00000478342.1	MIEF1-011	700	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489792.1	MIEF1-010	590	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464629.1	MIEF1-007	573	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467866.1	MIEF1-008	573	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481746.1	MIEF1-012	559	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479514.1	MIEF1-013	554	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465564.1	MIEF1-009	363	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494219.1	MIEF1-014	592	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 3, Transcript length: 1,379 bps, Translation length: 148 residues

Version

ENST00000428069.1

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000321328 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000428069.1 MIEF1-004

Summary