Transcript: ENST00000473613.1 TAB1-004

Description

TGF-beta activated kinase 1/MAP3K7 binding protein 1 [Source:HGNC Symbol;Acc:18157]

Gene Synonyms

3'-Tab1, MAP3K7IP1

Location

Chromosome 22: 39,795,783-39,812,854 forward strand.

About this transcript

This transcript has 4 exons, is associated with 7575 variant alleles and maps to 142 oligo probes.

Gene

This transcript is a product of gene ENSG00000100324.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000216160.6	TAB1-001	3237	504aa	ENSP00000216160.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13993	A8K6K3 B7Z9N9 Q15750	NM_006116.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000331454.3	TAB1-002	1660	462aa	ENSP00000333049.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13992	Q15750	NM_153497.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000488859.1	TAB1-009	804	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473491.1	TAB1-008	574	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461775.1	TAB1-003	573	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000473613.1	TAB1-004	534	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000490819.1	TAB1-006	240	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 534 bps,

Version

ENST00000473613.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000321316 (version 1)

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Transcript: ENST00000473613.1 TAB1-004

Summary