Transcript: ENST00000266254.7 TTLL1-001

Description

tubulin tyrosine ligase-like family, member 1 [Source:HGNC Symbol;Acc:1312]

Gene Synonyms

C22orf7, HS323M22B

Location

About this transcript

This transcript has 11 exons, is annotated with 6 domains and features, is associated with 24310 variant alleles and maps to 495 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000266254.7	TTLL1-001	1645	423aa	ENSP00000266254.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14043	O95922	NM_012263.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000331018.7	TTLL1-201	1686	394aa	ENSP00000333734.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O95922	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000445824.1	TTLL1-202	421	59aa	ENSP00000401928.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O95922	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000440761.1	TTLL1-002	1683	59aa	ENSP00000403332.1	Nonsense mediated decay		O95922	-	-
ENST00000439248.1	TTLL1-003	1659	59aa	ENSP00000401518.1	Nonsense mediated decay		O95922	-	-

Summary

Statistics

Exons: 11, Coding exons: 9, Transcript length: 1,645 bps, Translation length: 423 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O95922

CCDS

This transcript is a member of the Human CCDS set: CCDS14043

Version

ENST00000266254.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000319659 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.