Transcript: ENST00000348657.2 POLDIP3-002

Description

polymerase (DNA-directed), delta interacting protein 3 [Source:HGNC Symbol;Acc:23782]

Gene Synonyms

KIAA1649, PDIP46, SKAR

Location

Chromosome 22: 42,979,727-43,010,937 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 10 domains and features, is associated with 15960 variant alleles and maps to 694 oligo probes.

Gene

This transcript is a product of gene ENSG00000100227.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000252115.5	POLDIP3-001	3441	421aa	ENSP00000252115.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14038	Q96DI9 Q9BY77	NM_032311.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000348657.2	POLDIP3-002	3323	392aa	ENSP00000252116.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14039	Q9BY77	NM_178136.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000451060.2	POLDIP3-202	1351	186aa	ENSP00000397927.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DMM2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000339677.6	POLDIP3-201	783	185aa	ENSP00000343060.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6R954	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000445215.1	POLDIP3-003	3337	281aa	ENSP00000415234.1	Nonsense mediated decay		F8WCX5 Q659C6	-	-
ENST00000454057.1	POLDIP3-005	579	189aa	ENSP00000408046.1	Nonsense mediated decay		F8WEE2	-	-
ENST00000491021.1	POLDIP3-006	1028	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463133.1	POLDIP3-004	563	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 3,323 bps, Translation length: 392 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BY77

CCDS

This transcript is a member of the Human CCDS set: CCDS14039

Version

ENST00000348657.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000320434 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000348657.2 POLDIP3-002

Summary