Transcript: ENST00000215886.4 LGALS2-001

Description

lectin, galactoside-binding, soluble, 2 [Source:HGNC Symbol;Acc:6562]

Gene Synonyms

HL14

Location

About this transcript

This transcript has 4 exons, is annotated with 8 domains and features, is associated with 4875 variant alleles and maps to 301 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000215886.4	LGALS2-001	589	132aa	ENSP00000215886.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13950	B0QYC9 P05162 Q6PIT8	NM_006498.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000416480.1	LGALS2-002	406	29aa	ENSP00000407351.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QYC9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 589 bps, Translation length: 132 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P05162

CCDS

This transcript is a member of the Human CCDS set: CCDS13950

Version

ENST00000215886.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000318991 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.