Transcript: ENST00000593043.1 GADD45B-004

Description

growth arrest and DNA-damage-inducible, beta [Source:HGNC Symbol;Acc:4096]

Gene Synonyms

DKFZP566B133, GADD45BETA, MYD118

Location

Chromosome 19: 2,476,354-2,477,124 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 5 domains and features, is associated with 571 variant alleles and maps to 347 oligo probes.

Gene

This transcript is a product of gene ENSG00000099860.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000215631.4	GADD45B-001	1373	160aa	ENSP00000215631.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32868	O75293 Q6IX74	NM_015675.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587345.1	GADD45B-006	765	176aa	ENSP00000467490.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EPQ8 Q6IX74	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000593043.1	GADD45B-004	373	66aa	ENSP00000468374.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6IX74	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000587887.1	GADD45B-003	276	66aa	ENSP00000468620.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6IX74	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000585359.1	GADD45B-007	750	60aa	ENSP00000466414.1	Nonsense mediated decay		K7EM97	-	-
ENST00000592937.1	GADD45B-009	2007	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000586759.1	GADD45B-008	517	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 373 bps, Translation length: 66 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000593043.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000451342 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000593043.1 GADD45B-004

Summary