Transcript: ENST00000581962.1 MTAP-015

Description

methylthioadenosine phosphorylase [Source:HGNC Symbol;Acc:7413]

Gene Synonyms

BDMF, DMSFH, DMSMFH, LGMBF, MSAP, c86fus

Location

Chromosome 9: 21,859,219-21,862,091 forward strand.

About this transcript

This transcript has 2 exons, is associated with 1341 variant alleles and maps to 142 oligo probes.

Gene

This transcript is a product of gene ENSG00000099810.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000380172.4	MTAP-001	6122	283aa	ENSP00000369519.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6509	Q13126	NM_002451.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000580900.1	MTAP-008	1553	334aa	ENSP00000463424.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q13126	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000460874.2	MTAP-003	1434	300aa	ENSP00000461932.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DUC8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000577563.1	MTAP-009	339	112aa	ENSP00000462082.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KRN1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000419385.1	MTAP-006	2241	50aa	ENSP00000393507.1	Nonsense mediated decay		F8WES2	-	-
ENST00000580718.1	MTAP-007	1309	242aa	ENSP00000464616.1	Nonsense mediated decay		J3QSB7	-	-
ENST00000427788.2	MTAP-013	753	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000584988.1	MTAP-014	611	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000579422.1	MTAP-012	578	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484957.1	MTAP-004	399	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000581962.1	MTAP-015	323	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000580675.1	MTAP-011	310	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 323 bps,

Version

ENST00000581962.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000446067 (version 1)

Annotation Attributes

retained intron CDS [Definitions]

Favourite species

All species

Recent locations

Transcript: ENST00000581962.1 MTAP-015

Summary