Transcript: ENST00000297679.5 HSD3B7-001

Description

hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 [Source:HGNC Symbol;Acc:18324]

Gene Synonyms

C(27)-3BETA-HSD, CBAS1, PFIC4, SDR11E3

Location

Chromosome 16: 30,996,532-31,000,473 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 10 domains and features, is associated with 2209 variant alleles and maps to 341 oligo probes.

Gene

This transcript is a product of gene ENSG00000099377.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000297679.5	HSD3B7-001	2172	369aa	ENSP00000297679.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10698	I3L2H6 Q9H2F3	NM_025193.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000262520.6	HSD3B7-002	2200	196aa	ENSP00000262520.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45466	I3L2H6 Q9H2F3	NM_001142777.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000353250.5	HSD3B7-201	2022	196aa	ENSP00000370662.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45466	I3L2H6 Q9H2F3	NM_001142778.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000562932.1	HSD3B7-003	746	219aa	ENSP00000459852.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L2Q9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000574447.1	HSD3B7-004	746	176aa	ENSP00000459689.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L2H6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 2,172 bps, Translation length: 369 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H2F3

CCDS

This transcript is a member of the Human CCDS set: CCDS10698

Version

ENST00000297679.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000255554 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000297679.5 HSD3B7-001

Summary