Transcript: ENST00000466060.1 CATSPERG-015

Description

catsper channel auxiliary subunit gamma [Source:HGNC Symbol;Acc:25243]

Gene Synonyms

C19orf15, DKFZp434A1022, FLJ46353

Location

Chromosome 19: 38,834,268-38,849,200 forward strand.

About this transcript

This transcript has 6 exons, is associated with 7392 variant alleles and maps to 160 oligo probes.

Gene

This transcript is a product of gene ENSG00000099338.18 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000409235.3	CATSPERG-004	3746	1159aa	ENSP00000386962.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12514	Q32MQ2 Q6ZRH7	NM_021185.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000410018.1	CATSPERG-001	3626	1119aa	ENSP00000387057.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZI7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000215069.4	CATSPERG-201	3504	517aa	ENSP00000215069.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O75294	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409410.2	CATSPERG-003	2634	660aa	ENSP00000386950.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000489693.2	CATSPERG-016	541	180aa	ENSP00000470225.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000471517.1	CATSPERG-002	3785	159aa	ENSP00000468028.1	Nonsense mediated decay		K7EQY4	-	-
ENST00000312265.5	CATSPERG-005	3501	292aa	ENSP00000311314.5	Nonsense mediated decay		H9KV36	-	-
ENST00000412458.2	CATSPERG-007	2899	165aa	ENSP00000395093.2	Nonsense mediated decay		F8WDD6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000475343.2	CATSPERG-014	668	136aa	ENSP00000467947.1	Nonsense mediated decay		K7EQR6	-	-
ENST00000467739.1	CATSPERG-013	737	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466060.1	CATSPERG-015	633	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492088.3	CATSPERG-006	3761	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000488473.1	CATSPERG-011	722	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000477793.2	CATSPERG-009	653	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000470292.2	CATSPERG-012	567	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475646.1	CATSPERG-010	452	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000585424.1	CATSPERG-018	438	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 633 bps,

Version

ENST00000466060.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000330215 (version 1)

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Transcript: ENST00000466060.1 CATSPERG-015

Summary