Transcript: ENST00000215057.2 MZF1-001

Description

myeloid zinc finger 1 [Source:HGNC Symbol;Acc:13108]

Gene Synonyms

MZF, MZF-1, MZF1B, ZFP98, ZNF42, ZSCAN6, Zfp98

Location

Chromosome 19: 59,073,300-59,084,942 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 80 domains and features, is associated with 7032 variant alleles and maps to 448 oligo probes.

Gene

This transcript is a product of gene ENSG00000099326.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000215057.2	MZF1-001	2905	734aa	ENSP00000215057.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12988	M0R2C0 P28698	NM_198055.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000599369.1	MZF1-002	2587	734aa	ENSP00000469493.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12988	M0R2C0 P28698	NM_003422.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000594234.1	MZF1-003	2385	290aa	ENSP00000469378.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59427	M0R2C0 P28698	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000594108.1	MZF1-004	1110	259aa	ENSP00000472123.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R1U5 M0R2C0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000596039.1	MZF1-008	657	63aa	ENSP00000472454.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R2C0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000595245.1	MZF1-006	3261	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000600004.1	MZF1-007	2683	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000600048.1	MZF1-005	1409	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 2,905 bps, Translation length: 734 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P28698

CCDS

This transcript is a member of the Human CCDS set: CCDS12988

Version

ENST00000215057.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000467112 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000215057.2 MZF1-001

Summary