Transcript: ENST00000470508.1 TSPAN15-009

Description

tetraspanin 15 [Source:HGNC Symbol;Acc:23298]

Gene Synonyms

2700063A19Rik, NET-7, NET7, TM4SF15

Location

Chromosome 10: 71,265,724-71,266,985 forward strand.

About this transcript

This transcript has 2 exons, is associated with 623 variant alleles and maps to 246 oligo probes.

Gene

This transcript is a product of gene ENSG00000099282.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000373290.2	TSPAN15-001	1698	294aa	ENSP00000362387.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7294	O95858	NM_012339.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452130.1	TSPAN15-007	575	160aa	ENSP00000404528.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C285	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000459981.1	TSPAN15-006	834	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490083.1	TSPAN15-004	709	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486093.1	TSPAN15-005	693	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470508.1	TSPAN15-009	674	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000478112.1	TSPAN15-002	616	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475069.1	TSPAN15-003	605	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 674 bps,

Version

ENST00000470508.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000048452 (version 1)

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Transcript: ENST00000470508.1 TSPAN15-009

Summary